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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913317.1_cds_XP_016463362.1_56491
CDS Infomation

[gene=LOC107786410] [db_xref=GeneID:107786410] [protein=delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like] [protein_id=XP_016463362.1] [location=join(53357..53427,54396..54475,54823..54926,55141..55208,55371..55428,55543..55656,55990..56073,56421..56525,56827..56940,57980..58111,58205..58294,58436..58525,58976..59185,59288..59398,60468..60547,60642..60780)] [gbkey=CDS]
Sequence

ATGTATCGAGTAGCCGCATACAGGCAGTTGAAAAATAGAGTTTCTTGGATCAGTTCATTC
AATTTTACCAGATCAAATCATACTTTGCCCTTTGCTACGGTAAAAGCTGAAGAAATATCA
GGCTCTCAACCTGCTGAAGTCCACAACTTGGTGCAGGGGAAGTGGACAGGATCTTCTAGT
TGGAATACAATATTGGATCCCTTGAATGGGCAGCCATTCATTAAAGTTGCAGAAGTAGAT
GAATCAGAATTGCAGCCATTTGTGGAGAGCTTGTCCAGGTGCCCGAAACATGGTCTCCAT
AATCCATTCAAAGCACCAGAAAGGTACCTAATGCTTGGAGACGTATCTACAAAAGCAGCT
CATATGCTTGGCTTGCCTGAGGTTTCTGACTTCTTTGCTAAGCTAATACAGCGGGTGTCT
CCTAAGAGTTACCAACAAGCTCATGGTGAAGTTTTCGTCACACAGAAATTTCTGGAAAAT
TTCTGTGGTGATCAGGTTCGCTTTCTAGCTAGGTCTTTTGCAGTACCAGGAAATCATCTG
GGGCAGCAGAGCCATGGTTTTCGCTGGCCTTATGGACCTGTGGCGGTTATTGCTCCCTTT
AATTTTCCCTTGGAGATTCCTGTACTTCAGATGATGGGAGCATTATATATGGGGAATAAG
CCGGTCCTTAAAGTTGATAGCAAGGTATGTGTTGTTATGGAACAATTTCTTCGACTGCTT
CATGATTGTGGGTTACCTGCGGATAACGTGGATTTCATAAACTCAGATGGAAAGACGATG
AATAAGCTACTCATTGAGGGAAAACCACGCATGACTCTCTTCACAGGTAGCTCAAGAGTG
GCAGAGAAGTTAGCTGATGACCTAAGCGGTCGAGTCAAACTAGAAGATGCTGGATTTGAC
TGGAAGATCCTTGGGCCCGATGTCCATGAGGTGGATTATGTTGCATGGGTTTGTGATCAA
GATGCATATGCATGTAGTGGTCAGAAGTGTTCAGCTCAATCAATATTGTTCATGCATGAG
AATTGGGGTAGAAGCTCTCTCTTAGACAAAATGACCGAGCTTTCTGCTAGAAGAAAGTTA
GATGATTTAACTATTGGTCCTGTCCTTACGGTTACAACTGAAGCAATGCTAGACCATGCG
AAGAAATTACTTCAGATACCTGGATCAAGACTGCTCTTTGGTGGTGAAGCCTTACAAAAC
CATTCTATCCCTGCAATTTATGGAGCCATTAAACCCACTGCTATTTTCATACCACTTGAA
GAAATACTCAAAGAACAACATTATCATCTTGTGACCAAAGAGATTTTCGGGCCGTTCCAG
GTTGTCACTGAGTACAAAGATAATCAACTTCCGCTGGTTTTGAACGCCCTTGAAAAGATG
CATGCACATTTAACAGCTGCTGTGGTGTCAAATGACATACTGTTCCTGCAAGAAGTAATT
GGAAATTCAGTTAATGGAACTACTTATGCTGGATTGAGAGCAAGAACAACAGGGGCTCCA
CAGAATCACTGGTTTGGTCCAGCTGGGGACCCAAGAGGAGCAGGAATAGGTACTCCAGAA
GCTATAAAACTTGTATGGTCTTGCCACAGAGAAGTCATATATGATGTTGGTCCCGTGCCA
CTCGGATGGAAAACTCCAGCATCTACTTGA

Peptide Sequence

PEP ID

XP_016463362.1
PEP Infomation

PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Nicotiana tabacum]
Sequence

MYRVAAYRQLKNRVSWISSFNFTRSNHTLPFATVKAEEISGSQPAEVHNLVQGKWTGSSS
WNTILDPLNGQPFIKVAEVDESELQPFVESLSRCPKHGLHNPFKAPERYLMLGDVSTKAA
HMLGLPEVSDFFAKLIQRVSPKSYQQAHGEVFVTQKFLENFCGDQVRFLARSFAVPGNHL
GQQSHGFRWPYGPVAVIAPFNFPLEIPVLQMMGALYMGNKPVLKVDSKVCVVMEQFLRLL
HDCGLPADNVDFINSDGKTMNKLLIEGKPRMTLFTGSSRVAEKLADDLSGRVKLEDAGFD
WKILGPDVHEVDYVAWVCDQDAYACSGQKCSAQSILFMHENWGRSSLLDKMTELSARRKL
DDLTIGPVLTVTTEAMLDHAKKLLQIPGSRLLFGGEALQNHSIPAIYGAIKPTAIFIPLE
EILKEQHYHLVTKEIFGPFQVVTEYKDNQLPLVLNALEKMHAHLTAAVVSNDILFLQEVI
GNSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDVGPVP
LGWKTPAST

Transcript Sequence

Gene sequence data has not been registered.